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Open tools for reproducible neuroinformatics

We develop and maintain open-source tools for neuroinformatics, including machine learning libraries and analysis pipelines. Our tools are designed to be scalable, and adaptable to a wide range of neuroscience and biomedical applications. We also share our models to facilitate collaboration and accelerate progress in the field.

  • A framework for real-time brain signal streaming with MNE-Python.
    MNE-LSL is an open-source Python package that provides a robust framework for real-time brain signal streaming and processing. Integrated with MNE-Python, it acts as a high-level Python wrapper for the Lab Streaming Layer (LSL) C++ library, enabling seamless online neuroscience research and real-time applications.

  • Real-time brain signal decoding framework
    A Python-based online brain signal decoding framework to translate brain activity into actions or track cognitive states. It includes training and testing protocols which support Google Glass feedback, classifier training, signal visualization and recording.

  • Microsoft Brain Decoding Competition
    This First-Prize winning Python code can be run independently on any Python environment or in Azure Machine Learning Studio.

  • Stochastic Context-Free Grammar Learner
    This code provides the learning of Stochastic Context-Free Grammar (SCFG) structures and parameters. It was developed to learn hierarchical representations from various human tasks.

  • Structured Activity / Action Recognition Dataset
    This dataset provides 6 different types of structured activities, each represented as a sequence of various action components.

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